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nadiv: an R package to create relatedness matrices for estimating non-additive genetic variances in animal models


Metadata FieldValueLanguage
dc.contributorMathew Wolak, mew0099@auburn.eduen_US
dc.creatorWolak, Mathew E.
dc.date.accessioned2019-09-15T14:30:30Z
dc.date.available2019-09-15T14:30:30Z
dc.date.created2012-10
dc.identifier10.1111/j.2041-210X.2012.00213.xen_US
dc.identifier.urihttps://besjournals.onlinelibrary.wiley.com/doi/full/10.1111/j.2041-210X.2012.00213.xen_US
dc.identifier.urihttp://hdl.handle.net/11200/49604
dc.description.abstract1. The Non-Additive InVerses (nadiv) R software package contains functions to create and use non-additive genetic relationship matrices in the animal model of quantitative genetics. 2. This study discusses the concepts relevant to non-additive genetic effects and introduces the package. 3. nadiv includes functions to create the inverse of the dominance and epistatic relatedness matrices from a pedigree, which are required for estimating these genetic variances in an animal model. The study focuses on three widely used software programs in ecology and in evolutionary biology (ASReml, MCMCglmm and WOMBAT) and how nadiv can be used in conjunction with each. Simple tutorials are provided in the Supporting Information.en_US
dc.formatPDFen_US
dc.publisherNational Science Foundationen_US
dc.relation.ispartofMethods in Ecology and Evolutionen_US
dc.relation.ispartofseries2041-210Xen_US
dc.rights© 2012. This manuscript version is made available under the CC-BY-NC-ND 4.0 license http://creativecommons.org/licenses/by-nc-nd/4.0/en_US
dc.subjectdominanceen_US
dc.subjectepistasisen_US
dc.subjectprofile likelihooden_US
dc.subjectquantitative geneticsen_US
dc.subjectLINEAR MIXED MODELSen_US
dc.subjectINCOMPATIBILITIESen_US
dc.titlenadiv: an R package to create relatedness matrices for estimating non-additive genetic variances in animal modelsen_US
dc.typeSoftwareen_US
dc.type.genreJournal Article, Academic Journalen_US
dc.citation.volume3en_US
dc.citation.issue5en_US
dc.citation.spage792en_US
dc.citation.epage796en_US
dc.description.statusPublisheden_US
dc.description.peerreviewYesen_US
dc.creator.orcid0000-0002-7962-0071en_US

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